fix links

Links.md

@@ -11,7 +11,7 @@ You can follow external link by either double clicking (will open new tab/window
 
 Links to internal notes are created a bit differently. To create link to note at current cursor position, press ```CTRL-L```.
 
-In the dialog you can see radio button to choose from different types of linking. First one is classic link to note, the other two are related to [cloning](Cloning.md) and will be covered separately.
+In the dialog you can see radio button to choose from different types of linking. First one is classic link to note, the other two are related to [[cloning|Cloning]] and will be covered separately.
 
 [[gifs/create-link-to-note.gif]]
 

Protected notes.md

@@ -3,7 +3,7 @@ Trilium is meant to store all kinds of data - including potentially sensitive da
 For such sensitive data Trilium can protect these notes which essentially means:
 
 * encrypting the note with encryption key based on your password. 
-    * This means that without your password, protected notes are not decipherable so even if somebody managed to steal your Trilium [document](Document.md), your protected notes could not be read.
+    * This means that without your password, protected notes are not decipherable so even if somebody managed to steal your Trilium [[document|Document], your protected notes could not be read.
 * time-limited access to protected notes
     * To first access protected notes you need to enter your password which will decrypt the note and allow you to read / write them. But after certain time period (by default 10 minutes) this decrypted note is unloaded from memory and to read it again you need to enter your password again.
     * This protects against a possible scenario where you leave your computer unlocked for a long time and somebody can access your Trilium application.
@@ -34,6 +34,6 @@ Not encrypted:
     * here we use scrypt for [key stretching](https://en.wikipedia.org/wiki/Key_stretching)
 4. Hash produced in the last step is used to decrypt actual _data encryption key_
     * data encryption key is encrypted with [AES-128](https://en.wikipedia.org/wiki/Advanced_Encryption_Standard) with random [IV](https://en.wikipedia.org/wiki/Initialization_vector)
-    * data encryption key is random key generated at the time of [document](Document.md) initialization and is constant over the lifetime of the document. If we change password, only we re-encrypt only this key.
+    * data encryption key is random key generated at the time of [[document|Document] initialization and is constant over the lifetime of the document. If we change password, only we re-encrypt only this key.
 5. We use data encryption key to decrypt actual data - note title and content.
     * encryption used is again AES-128 with [CBC chaining](https://en.wikipedia.org/wiki/Block_cipher_mode_of_operation). IV is primary key (noteId for notes and noteHistoryId for history items)

Synchronization.md

@@ -10,7 +10,7 @@ This means that there's one central server (we'll call this instance _sync serve
 
 ### Preparation
 
-Here we assume you already have Trilium running on your computer and you want to setup sync server so you can edit same [document](Document.md) online.
+Here we assume you already have Trilium running on your computer and you want to setup sync server so you can edit same [[document|Document] online.
 
 Of course you need to install Trilium on the sync server. It's recommended to have exact same version of Trilium installed everywhere. Trilium will reject synchronization if there's a mismatch in Trilium database version between client and sync server.
 
@@ -20,7 +20,7 @@ Before you start the process of setting everything up, it's recommended to stop
 
 1. Run Trilium in your new environment - this will generate default directory ```trilium-data``` in your home directory, default config etc.
 2. Stop Trilium in the new environment
-3. Copy your existing trilium [document](Document.md) file (by default located in your home directory under ```trilium-data/document.db```) into your target environment into ```trilium-data``` directory
+3. Copy your existing trilium [[document|Document] file (by default located in your home directory under ```trilium-data/document.db```) into your target environment into ```trilium-data``` directory
 4. Edit client's ```trilium-data/config.ini``` and set ```syncServerHost``` to the host and port where the sync server is running
 5. Start the sync server
 6. Start the client
@@ -29,7 +29,7 @@ You should be able to see in the client logs that sync connection has been estab
 
 ### Additional sync client(s) setup
 
-Setting up extra sync clients is very similar to setting up a server - make sure everything is stopped, copy the [document](Document.md), set up client's ```syncServerHost``` in ```config.ini``` to point to the sync server and then start everything up.
+Setting up extra sync clients is very similar to setting up a server - make sure everything is stopped, copy the [[document|Document], set up client's ```syncServerHost``` in ```config.ini``` to point to the sync server and then start everything up.
 
 ## Conflict resolution